Software tools for synthetic biology

Open-source libraries, CLIs, and applications to enable synthetic biology workflows, pipelines, and best practices.

DNA sequence viewer supporting standard input formats.

GitHub

• Language: JavaScript
• License: MIT
• Launch

DNA assembly automation.

GitHub

• Language: Python
• License: GPL-2.0
• Docs

Repository-based plasmid design.

GitHub

• Language: Python
• License: GPL-2.0
• Docs

Pythonic nucleic acid folding.

GitHub

• Language: Python
• License: MIT
• Docs

Codon optimization with recurrent neural networks.

GitHub

• Language: Python
• License: MIT
• Docs

Primer design aimed at DNA assembly.

GitHub

• Language: Python
• License: MIT
• Docs

Parse sequence files or accession IDs to a simple, common format.

GitHub

• Language: JavaScript
• License: MIT
• Docs